Cluster: HRGMv2_2213_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2213
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2213_8 | HRGMv2_2213_8_58 | 55525 | 57030 | + | GH32 |
| pfam | HRGMv2_2213_8 | HRGMv2_2213_8_59 | 57116 | 57562 | - | Tyr_Deacylase |
| peptidase | HRGMv2_2213_8 | HRGMv2_2213_8_60 | 57782 | 59356 | + | S16.UNW |
| TC | HRGMv2_2213_8 | HRGMv2_2213_8_61 | 59347 | 60453 | + | 3.A.11.1.3 |
Gene ID: HRGMv2_2213_8_58
Type: CAZyme
Location: 55525 - 57030 (+)
Type: CAZyme
Location: 55525 - 57030 (+)
Gene ID: HRGMv2_2213_8_59
Type: pfam
Location: 57116 - 57562 (-)
Type: pfam
Location: 57116 - 57562 (-)
Gene ID: HRGMv2_2213_8_60
Type: peptidase
Location: 57782 - 59356 (+)
Type: peptidase
Location: 57782 - 59356 (+)
Gene ID: HRGMv2_2213_8_61
Type: TC
Location: 59347 - 60453 (+)
Type: TC
Location: 59347 - 60453 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp958405355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.