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Cluster: HRGMv2_2213_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2213_5 HRGMv2_2213_5_75 81327 82691 - AA4
TC HRGMv2_2213_5 HRGMv2_2213_5_76 82698 83579 - 3.A.1.24.1
TC HRGMv2_2213_5 HRGMv2_2213_5_77 83604 84284 - 3.A.1.24.5
TC HRGMv2_2213_5 HRGMv2_2213_5_78 84277 85311 - 3.A.1.24.6
TF HRGMv2_2213_5 HRGMv2_2213_5_79 85478 86383 - HTH_1
TC HRGMv2_2213_5 HRGMv2_2213_5_80 86383 87789 - 2.A.25.1.4
pfam HRGMv2_2213_5 HRGMv2_2213_5_81 87954 89216 - DegT_DnrJ_EryC1 | Cys_Met_Meta_PP
pfam HRGMv2_2213_5 HRGMv2_2213_5_82 89213 90127 - AP_endonuc_2
CAZyme HRGMv2_2213_5 HRGMv2_2213_5_83 90177 90899 - CE4
STP HRGMv2_2213_5 HRGMv2_2213_5_84 90978 91799 - Sigma70_r3
pfam HRGMv2_2213_5 HRGMv2_2213_5_85 91897 92826 - Cadherin-like
CAZyme HRGMv2_2213_5 HRGMv2_2213_5_86 92842 95688 - GH73
Gene ID: HRGMv2_2213_5_75
Type: CAZyme
Location: 81327 - 82691 (-)
Gene ID: HRGMv2_2213_5_76
Type: TC
Location: 82698 - 83579 (-)
Gene ID: HRGMv2_2213_5_77
Type: TC
Location: 83604 - 84284 (-)
Gene ID: HRGMv2_2213_5_78
Type: TC
Location: 84277 - 85311 (-)
Gene ID: HRGMv2_2213_5_79
Type: TF
Location: 85478 - 86383 (-)
Gene ID: HRGMv2_2213_5_80
Type: TC
Location: 86383 - 87789 (-)
Gene ID: HRGMv2_2213_5_81
Type: pfam
Location: 87954 - 89216 (-)
Gene ID: HRGMv2_2213_5_82
Type: pfam
Location: 89213 - 90127 (-)
Gene ID: HRGMv2_2213_5_83
Type: CAZyme
Location: 90177 - 90899 (-)
Gene ID: HRGMv2_2213_5_84
Type: STP
Location: 90978 - 91799 (-)
Gene ID: HRGMv2_2213_5_85
Type: pfam
Location: 91897 - 92826 (-)
Gene ID: HRGMv2_2213_5_86
Type: CAZyme
Location: 92842 - 95688 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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