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Cluster: HRGMv2_2213_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2213_4 HRGMv2_2213_4_60 60473 61417 - GT2
CAZyme HRGMv2_2213_4 HRGMv2_2213_4_61 61390 62589 - GT2
TC HRGMv2_2213_4 HRGMv2_2213_4_62 62602 63342 - 3.A.1.103.1
TC HRGMv2_2213_4 HRGMv2_2213_4_63 63354 64142 - 3.A.1.103.6
CAZyme HRGMv2_2213_4 HRGMv2_2213_4_64 64167 65171 - GT2
CAZyme HRGMv2_2213_4 HRGMv2_2213_4_65 65267 66268 - GT2
pfam HRGMv2_2213_4 HRGMv2_2213_4_66 66770 67891 - DUF362
pfam HRGMv2_2213_4 HRGMv2_2213_4_67 67936 69135 - MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_25 | Methyltransf_31
TC HRGMv2_2213_4 HRGMv2_2213_4_68 69154 70320 - 3.A.4.1.2
TC HRGMv2_2213_4 HRGMv2_2213_4_69 70317 71525 - 3.A.4.1.2
Gene ID: HRGMv2_2213_4_60
Type: CAZyme
Location: 60473 - 61417 (-)
Gene ID: HRGMv2_2213_4_61
Type: CAZyme
Location: 61390 - 62589 (-)
Gene ID: HRGMv2_2213_4_62
Type: TC
Location: 62602 - 63342 (-)
Gene ID: HRGMv2_2213_4_63
Type: TC
Location: 63354 - 64142 (-)
Gene ID: HRGMv2_2213_4_64
Type: CAZyme
Location: 64167 - 65171 (-)
Gene ID: HRGMv2_2213_4_65
Type: CAZyme
Location: 65267 - 66268 (-)
Gene ID: HRGMv2_2213_4_66
Type: pfam
Location: 66770 - 67891 (-)
Gene ID: HRGMv2_2213_4_67
Type: pfam
Location: 67936 - 69135 (-)
Gene ID: HRGMv2_2213_4_68
Type: TC
Location: 69154 - 70320 (-)
Gene ID: HRGMv2_2213_4_69
Type: TC
Location: 70317 - 71525 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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