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Cluster: HRGMv2_2213_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2213_2 HRGMv2_2213_2_120 123406 124866 + 2.A.37.3.3
pfam HRGMv2_2213_2 HRGMv2_2213_2_121 124888 125619 + MgtC
CAZyme HRGMv2_2213_2 HRGMv2_2213_2_122 125704 126861 - CE9
CAZyme HRGMv2_2213_2 HRGMv2_2213_2_123 126861 128315 - GH165
pfam HRGMv2_2213_2 HRGMv2_2213_2_124 128333 129250 - DHDPS
pfam HRGMv2_2213_2 HRGMv2_2213_2_125 129279 129731 - DUF386
TC HRGMv2_2213_2 HRGMv2_2213_2_126 129728 130747 - 3.A.1.5.20
TC HRGMv2_2213_2 HRGMv2_2213_2_127 130749 131777 - 3.A.1.5.12
TC HRGMv2_2213_2 HRGMv2_2213_2_128 131789 132676 - 3.A.1.5.20
TC HRGMv2_2213_2 HRGMv2_2213_2_129 132694 133623 - 3.A.1.5.20
TC HRGMv2_2213_2 HRGMv2_2213_2_130 133788 135395 - 3.A.1.5.28
Gene ID: HRGMv2_2213_2_120
Type: TC
Location: 123406 - 124866 (+)
Gene ID: HRGMv2_2213_2_121
Type: pfam
Location: 124888 - 125619 (+)
Gene ID: HRGMv2_2213_2_122
Type: CAZyme
Location: 125704 - 126861 (-)
Gene ID: HRGMv2_2213_2_123
Type: CAZyme
Location: 126861 - 128315 (-)
Gene ID: HRGMv2_2213_2_124
Type: pfam
Location: 128333 - 129250 (-)
Gene ID: HRGMv2_2213_2_125
Type: pfam
Location: 129279 - 129731 (-)
Gene ID: HRGMv2_2213_2_126
Type: TC
Location: 129728 - 130747 (-)
Gene ID: HRGMv2_2213_2_127
Type: TC
Location: 130749 - 131777 (-)
Gene ID: HRGMv2_2213_2_128
Type: TC
Location: 131789 - 132676 (-)
Gene ID: HRGMv2_2213_2_129
Type: TC
Location: 132694 - 133623 (-)
Gene ID: HRGMv2_2213_2_130
Type: TC
Location: 133788 - 135395 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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