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Cluster: HRGMv2_2213_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2213_45 HRGMv2_2213_45_3 706 3294 + 3.A.3.5.15
STP HRGMv2_2213_45 HRGMv2_2213_45_4 3346 3543 + HMA
CAZyme HRGMv2_2213_45 HRGMv2_2213_45_5 3691 4632 + GT2
pfam HRGMv2_2213_45 HRGMv2_2213_45_6 4636 7236 + YfhO
TC HRGMv2_2213_45 HRGMv2_2213_45_7 7305 8300 + 9.B.157.1.1
TC HRGMv2_2213_45 HRGMv2_2213_45_8 8357 9646 + 3.A.7.16.1
TC HRGMv2_2213_45 HRGMv2_2213_45_9 9671 10564 + 3.A.7.16.1
NULL(UNKNOWN) HRGMv2_2213_45 HRGMv2_2213_45_10 10569 11849 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2213_45 HRGMv2_2213_45_11 11943 13343 + 9.B.18.1.3
CAZyme HRGMv2_2213_45 HRGMv2_2213_45_12 13333 14106 + GT2
pfam HRGMv2_2213_45 HRGMv2_2213_45_13 14107 14919 + Glycos_transf_2
pfam HRGMv2_2213_45 HRGMv2_2213_45_14 14933 16318 + Wzy_C
CAZyme HRGMv2_2213_45 HRGMv2_2213_45_15 16287 16988 + GT2
Gene ID: HRGMv2_2213_45_3
Type: TC
Location: 706 - 3294 (+)
Gene ID: HRGMv2_2213_45_4
Type: STP
Location: 3346 - 3543 (+)
Gene ID: HRGMv2_2213_45_5
Type: CAZyme
Location: 3691 - 4632 (+)
Gene ID: HRGMv2_2213_45_6
Type: pfam
Location: 4636 - 7236 (+)
Gene ID: HRGMv2_2213_45_7
Type: TC
Location: 7305 - 8300 (+)
Gene ID: HRGMv2_2213_45_8
Type: TC
Location: 8357 - 9646 (+)
Gene ID: HRGMv2_2213_45_9
Type: TC
Location: 9671 - 10564 (+)
Gene ID: HRGMv2_2213_45_10
Type:
Location: 10569 - 11849 (+)
Gene ID: HRGMv2_2213_45_11
Type: TC
Location: 11943 - 13343 (+)
Gene ID: HRGMv2_2213_45_12
Type: CAZyme
Location: 13333 - 14106 (+)
Gene ID: HRGMv2_2213_45_13
Type: pfam
Location: 14107 - 14919 (+)
Gene ID: HRGMv2_2213_45_14
Type: pfam
Location: 14933 - 16318 (+)
Gene ID: HRGMv2_2213_45_15
Type: CAZyme
Location: 16287 - 16988 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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