Cluster: HRGMv2_2213_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2213
- CGC Family ID: CGCFAM_09989
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2213_38 | HRGMv2_2213_38_11 | 15362 | 16060 | - | GT51 |
| STP | HRGMv2_2213_38 | HRGMv2_2213_38_12 | 16285 | 16644 | + | Sigma70_r2 |
| NULL(UNKNOWN) | HRGMv2_2213_38 | HRGMv2_2213_38_13 | 16794 | 17576 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2213_38 | HRGMv2_2213_38_14 | 17577 | 18455 | + | 3.A.1.148.3 |
Gene ID: HRGMv2_2213_38_11
Type: CAZyme
Location: 15362 - 16060 (-)
Type: CAZyme
Location: 15362 - 16060 (-)
Gene ID: HRGMv2_2213_38_12
Type: STP
Location: 16285 - 16644 (+)
Type: STP
Location: 16285 - 16644 (+)
Gene ID: HRGMv2_2213_38_13
Type:
Location: 16794 - 17576 (+)
Type:
Location: 16794 - 17576 (+)
Gene ID: HRGMv2_2213_38_14
Type: TC
Location: 17577 - 18455 (+)
Type: TC
Location: 17577 - 18455 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp958405355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.