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Cluster: HRGMv2_2213_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2213_37 HRGMv2_2213_37_9 7389 9269 - GH13_4
TC HRGMv2_2213_37 HRGMv2_2213_37_10 9338 10435 - 3.A.1.1.22
pfam HRGMv2_2213_37 HRGMv2_2213_37_11 10466 11977 - GalP_UDP_transf | GalP_UDP_tr_C
pfam HRGMv2_2213_37 HRGMv2_2213_37_12 12012 13181 - GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg
CAZyme HRGMv2_2213_37 HRGMv2_2213_37_13 13162 14829 - GH13_31
CAZyme HRGMv2_2213_37 HRGMv2_2213_37_14 14836 17019 - GH36
TC HRGMv2_2213_37 HRGMv2_2213_37_15 17036 17872 - 3.A.1.1.28
TC HRGMv2_2213_37 HRGMv2_2213_37_16 17872 18747 - 3.A.1.1.28
STP HRGMv2_2213_37 HRGMv2_2213_37_17 18767 20050 - SBP_bac_1
TF HRGMv2_2213_37 HRGMv2_2213_37_18 20266 21117 + HTH_AraC | HTH_AraC
TC HRGMv2_2213_37 HRGMv2_2213_37_19 21227 21952 - 3.A.1.3.25
TC HRGMv2_2213_37 HRGMv2_2213_37_20 21939 22652 - 3.A.1.3.15
TC HRGMv2_2213_37 HRGMv2_2213_37_21 22669 23496 - 3.A.1.3.15
Gene ID: HRGMv2_2213_37_9
Type: CAZyme
Location: 7389 - 9269 (-)
Gene ID: HRGMv2_2213_37_10
Type: TC
Location: 9338 - 10435 (-)
Gene ID: HRGMv2_2213_37_11
Type: pfam
Location: 10466 - 11977 (-)
Gene ID: HRGMv2_2213_37_12
Type: pfam
Location: 12012 - 13181 (-)
Gene ID: HRGMv2_2213_37_13
Type: CAZyme
Location: 13162 - 14829 (-)
Gene ID: HRGMv2_2213_37_14
Type: CAZyme
Location: 14836 - 17019 (-)
Gene ID: HRGMv2_2213_37_15
Type: TC
Location: 17036 - 17872 (-)
Gene ID: HRGMv2_2213_37_16
Type: TC
Location: 17872 - 18747 (-)
Gene ID: HRGMv2_2213_37_17
Type: STP
Location: 18767 - 20050 (-)
Gene ID: HRGMv2_2213_37_18
Type: TF
Location: 20266 - 21117 (+)
Gene ID: HRGMv2_2213_37_19
Type: TC
Location: 21227 - 21952 (-)
Gene ID: HRGMv2_2213_37_20
Type: TC
Location: 21939 - 22652 (-)
Gene ID: HRGMv2_2213_37_21
Type: TC
Location: 22669 - 23496 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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