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Cluster: HRGMv2_2213_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2213_1 HRGMv2_2213_1_126 137242 138006 - 3.A.1.5.32
TC HRGMv2_2213_1 HRGMv2_2213_1_127 137999 139006 - 3.A.1.5.2
TC HRGMv2_2213_1 HRGMv2_2213_1_128 139008 139838 - 3.A.1.5.11
TC HRGMv2_2213_1 HRGMv2_2213_1_129 139841 140788 - 3.A.1.5.11
TC HRGMv2_2213_1 HRGMv2_2213_1_130 140810 142402 - 3.A.1.5.17
pfam HRGMv2_2213_1 HRGMv2_2213_1_131 142585 143520 - EamA | EamA
CAZyme HRGMv2_2213_1 HRGMv2_2213_1_132 143517 144953 - GT5
Gene ID: HRGMv2_2213_1_126
Type: TC
Location: 137242 - 138006 (-)
Gene ID: HRGMv2_2213_1_127
Type: TC
Location: 137999 - 139006 (-)
Gene ID: HRGMv2_2213_1_128
Type: TC
Location: 139008 - 139838 (-)
Gene ID: HRGMv2_2213_1_129
Type: TC
Location: 139841 - 140788 (-)
Gene ID: HRGMv2_2213_1_130
Type: TC
Location: 140810 - 142402 (-)
Gene ID: HRGMv2_2213_1_131
Type: pfam
Location: 142585 - 143520 (-)
Gene ID: HRGMv2_2213_1_132
Type: CAZyme
Location: 143517 - 144953 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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