Cluster: HRGMv2_2212_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2212
- CGC Family ID: CGCFAM_03326
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2212_7 | HRGMv2_2212_7_57 | 74115 | 76940 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2212_7 | HRGMv2_2212_7_58 | 76942 | 77994 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2212_7 | HRGMv2_2212_7_59 | 78111 | 78872 | + | 2.A.79.1.5 |
| TC | HRGMv2_2212_7 | HRGMv2_2212_7_60 | 78869 | 79303 | + | 2.A.79.1.6 |
Gene ID: HRGMv2_2212_7_57
Type: CAZyme
Location: 74115 - 76940 (+)
Type: CAZyme
Location: 74115 - 76940 (+)
Gene ID: HRGMv2_2212_7_58
Type:
Location: 76942 - 77994 (+)
Type:
Location: 76942 - 77994 (+)
Gene ID: HRGMv2_2212_7_59
Type: TC
Location: 78111 - 78872 (+)
Type: TC
Location: 78111 - 78872 (+)
Gene ID: HRGMv2_2212_7_60
Type: TC
Location: 78869 - 79303 (+)
Type: TC
Location: 78869 - 79303 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum soehngenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2212_7_59 | vegan > omnivore | 1.64611 | 0.00782 |
| HRGMv2_2212_7_60 | vegan > omnivore | 3.81268 | 0.00782 |