Cluster: HRGMv2_2212_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2212
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2212_7 | HRGMv2_2212_7_2 | 1557 | 2213 | - | 2.A.115.2.3 |
| CAZyme | HRGMv2_2212_7 | HRGMv2_2212_7_3 | 2229 | 4460 | - | GH36 |
| TC | HRGMv2_2212_7 | HRGMv2_2212_7_4 | 4484 | 5908 | - | 2.A.2.1.1 |
Gene ID: HRGMv2_2212_7_2
Type: TC
Location: 1557 - 2213 (-)
Type: TC
Location: 1557 - 2213 (-)
Gene ID: HRGMv2_2212_7_3
Type: CAZyme
Location: 2229 - 4460 (-)
Type: CAZyme
Location: 2229 - 4460 (-)
Gene ID: HRGMv2_2212_7_4
Type: TC
Location: 4484 - 5908 (-)
Type: TC
Location: 4484 - 5908 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum soehngenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2212_7_4 | vegan > omnivore | 1.93108 | 0.00782 |
| HRGMv2_2212_7_4 | vegetarian > omnivore | 1.75183 | 0.03194 |