Cluster: HRGMv2_2212_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2212
- CGC Family ID: CGCFAM_03807
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2212_3 | HRGMv2_2212_3_42 | 44900 | 46171 | - | 9.B.174.1.1 |
| pfam | HRGMv2_2212_3 | HRGMv2_2212_3_43 | 46324 | 47412 | - | HTH_30 | GGDEF_2 |
| TC | HRGMv2_2212_3 | HRGMv2_2212_3_44 | 47618 | 48349 | - | 3.A.1.1.22 |
| CAZyme | HRGMv2_2212_3 | HRGMv2_2212_3_45 | 48687 | 49550 | - | GT26 |
Gene ID: HRGMv2_2212_3_42
Type: TC
Location: 44900 - 46171 (-)
Type: TC
Location: 44900 - 46171 (-)
Gene ID: HRGMv2_2212_3_43
Type: pfam
Location: 46324 - 47412 (-)
Type: pfam
Location: 46324 - 47412 (-)
Gene ID: HRGMv2_2212_3_44
Type: TC
Location: 47618 - 48349 (-)
Type: TC
Location: 47618 - 48349 (-)
Gene ID: HRGMv2_2212_3_45
Type: CAZyme
Location: 48687 - 49550 (-)
Type: CAZyme
Location: 48687 - 49550 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum soehngenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2212_3_43 | vegetarian > vegan | 1.08765 | 0.00624 |