Cluster: HRGMv2_2212_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2212
- CGC Family ID: CGCFAM_03146
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2212_55 | HRGMv2_2212_55_2 | 392 | 1225 | - | 3.A.1.1.47 |
| TC | HRGMv2_2212_55 | HRGMv2_2212_55_3 | 1238 | 2134 | - | 3.A.1.1.20 |
| TC | HRGMv2_2212_55 | HRGMv2_2212_55_4 | 2210 | 3517 | - | 3.A.1.1.40 |
| CAZyme | HRGMv2_2212_55 | HRGMv2_2212_55_5 | 3541 | 5550 | - | GH151 |
| TF | HRGMv2_2212_55 | HRGMv2_2212_55_6 | 5649 | 6137 | - | HTH_AraC | HTH_AraC |
| STP | HRGMv2_2212_55 | HRGMv2_2212_55_7 | 6130 | 7164 | - | Response_reg |
| TC | HRGMv2_2212_55 | HRGMv2_2212_55_8 | 7161 | 8927 | - | 8.A.59.2.1 |
Gene ID: HRGMv2_2212_55_2
Type: TC
Location: 392 - 1225 (-)
Type: TC
Location: 392 - 1225 (-)
Gene ID: HRGMv2_2212_55_3
Type: TC
Location: 1238 - 2134 (-)
Type: TC
Location: 1238 - 2134 (-)
Gene ID: HRGMv2_2212_55_4
Type: TC
Location: 2210 - 3517 (-)
Type: TC
Location: 2210 - 3517 (-)
Gene ID: HRGMv2_2212_55_5
Type: CAZyme
Location: 3541 - 5550 (-)
Type: CAZyme
Location: 3541 - 5550 (-)
Gene ID: HRGMv2_2212_55_6
Type: TF
Location: 5649 - 6137 (-)
Type: TF
Location: 5649 - 6137 (-)
Gene ID: HRGMv2_2212_55_7
Type: STP
Location: 6130 - 7164 (-)
Type: STP
Location: 6130 - 7164 (-)
Gene ID: HRGMv2_2212_55_8
Type: TC
Location: 7161 - 8927 (-)
Type: TC
Location: 7161 - 8927 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum soehngenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.