Cluster: HRGMv2_2212_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2212
- CGC Family ID: CGCFAM_02088
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2212_42 | HRGMv2_2212_42_7 | 4289 | 4948 | - | 1.C.113.1.2 |
| pfam | HRGMv2_2212_42 | HRGMv2_2212_42_8 | 5150 | 5968 | + | CN_hydrolase |
| TC | HRGMv2_2212_42 | HRGMv2_2212_42_9 | 6190 | 7776 | + | 3.A.18.1.1 |
| CAZyme | HRGMv2_2212_42 | HRGMv2_2212_42_10 | 7876 | 9996 | + | GH13_39 |
Gene ID: HRGMv2_2212_42_7
Type: TC
Location: 4289 - 4948 (-)
Type: TC
Location: 4289 - 4948 (-)
Gene ID: HRGMv2_2212_42_8
Type: pfam
Location: 5150 - 5968 (+)
Type: pfam
Location: 5150 - 5968 (+)
Gene ID: HRGMv2_2212_42_9
Type: TC
Location: 6190 - 7776 (+)
Type: TC
Location: 6190 - 7776 (+)
Gene ID: HRGMv2_2212_42_10
Type: CAZyme
Location: 7876 - 9996 (+)
Type: CAZyme
Location: 7876 - 9996 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum soehngenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.