Cluster: HRGMv2_2212_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2212
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2212_37 | HRGMv2_2212_37_16 | 17621 | 19102 | - | GH77 |
| TF | HRGMv2_2212_37 | HRGMv2_2212_37_17 | 19143 | 20159 | - | LacI |
| TC | HRGMv2_2212_37 | HRGMv2_2212_37_18 | 20189 | 21022 | - | 3.A.1.1.45 |
| TC | HRGMv2_2212_37 | HRGMv2_2212_37_19 | 21022 | 21864 | - | 3.A.1.1.45 |
| TC | HRGMv2_2212_37 | HRGMv2_2212_37_20 | 22009 | 23328 | - | 3.A.1.1.45 |
| TC | HRGMv2_2212_37 | HRGMv2_2212_37_21 | 23824 | 24996 | + | 3.A.1.1.26 |
Gene ID: HRGMv2_2212_37_16
Type: CAZyme
Location: 17621 - 19102 (-)
Type: CAZyme
Location: 17621 - 19102 (-)
Gene ID: HRGMv2_2212_37_17
Type: TF
Location: 19143 - 20159 (-)
Type: TF
Location: 19143 - 20159 (-)
Gene ID: HRGMv2_2212_37_18
Type: TC
Location: 20189 - 21022 (-)
Type: TC
Location: 20189 - 21022 (-)
Gene ID: HRGMv2_2212_37_19
Type: TC
Location: 21022 - 21864 (-)
Type: TC
Location: 21022 - 21864 (-)
Gene ID: HRGMv2_2212_37_20
Type: TC
Location: 22009 - 23328 (-)
Type: TC
Location: 22009 - 23328 (-)
Gene ID: HRGMv2_2212_37_21
Type: TC
Location: 23824 - 24996 (+)
Type: TC
Location: 23824 - 24996 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum soehngenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.