Cluster: HRGMv2_2212_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2212
- CGC Family ID: CGCFAM_00539
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2212_2 | HRGMv2_2212_2_99 | 121807 | 123525 | + | CBM50 |
| TC | HRGMv2_2212_2 | HRGMv2_2212_2_100 | 124017 | 124514 | + | 4.A.1.2.11 |
| TC | HRGMv2_2212_2 | HRGMv2_2212_2_101 | 124602 | 125339 | + | 4.A.1.1.7 |
Gene ID: HRGMv2_2212_2_99
Type: CAZyme
Location: 121807 - 123525 (+)
Type: CAZyme
Location: 121807 - 123525 (+)
Gene ID: HRGMv2_2212_2_100
Type: TC
Location: 124017 - 124514 (+)
Type: TC
Location: 124017 - 124514 (+)
Gene ID: HRGMv2_2212_2_101
Type: TC
Location: 124602 - 125339 (+)
Type: TC
Location: 124602 - 125339 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum soehngenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2212_2_99 | vegan > omnivore | 1.22700 | 0.00782 |
| HRGMv2_2212_2_100 | vegan > omnivore | 2.33444 | 0.00782 |