Cluster: HRGMv2_2212_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2212
- CGC Family ID: CGCFAM_00096
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2212_23 | HRGMv2_2212_23_24 | 26069 | 27157 | - | GT4 |
| CAZyme | HRGMv2_2212_23 | HRGMv2_2212_23_25 | 27170 | 28222 | - | GT4 |
| pfam | HRGMv2_2212_23 | HRGMv2_2212_23_26 | 28206 | 29114 | - | ATPgrasp_TupA |
| CAZyme | HRGMv2_2212_23 | HRGMv2_2212_23_27 | 29131 | 30720 | - | GT2 |
| pfam | HRGMv2_2212_23 | HRGMv2_2212_23_28 | 30729 | 32015 | - | DegT_DnrJ_EryC1 |
| TC | HRGMv2_2212_23 | HRGMv2_2212_23_29 | 32078 | 34192 | - | 9.B.18.2.1 |
Gene ID: HRGMv2_2212_23_24
Type: CAZyme
Location: 26069 - 27157 (-)
Type: CAZyme
Location: 26069 - 27157 (-)
Gene ID: HRGMv2_2212_23_25
Type: CAZyme
Location: 27170 - 28222 (-)
Type: CAZyme
Location: 27170 - 28222 (-)
Gene ID: HRGMv2_2212_23_26
Type: pfam
Location: 28206 - 29114 (-)
Type: pfam
Location: 28206 - 29114 (-)
Gene ID: HRGMv2_2212_23_27
Type: CAZyme
Location: 29131 - 30720 (-)
Type: CAZyme
Location: 29131 - 30720 (-)
Gene ID: HRGMv2_2212_23_28
Type: pfam
Location: 30729 - 32015 (-)
Type: pfam
Location: 30729 - 32015 (-)
Gene ID: HRGMv2_2212_23_29
Type: TC
Location: 32078 - 34192 (-)
Type: TC
Location: 32078 - 34192 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum soehngenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.