Cluster: HRGMv2_2212_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2212
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2212_16 | HRGMv2_2212_16_2 | 3629 | 5575 | - | GT2 |
| CAZyme | HRGMv2_2212_16 | HRGMv2_2212_16_3 | 5621 | 6703 | - | GH5_2 |
| peptidase | HRGMv2_2212_16 | HRGMv2_2212_16_4 | 6917 | 8098 | - | M20.UPD |
| pfam | HRGMv2_2212_16 | HRGMv2_2212_16_5 | 8127 | 8603 | - | HAAS |
| TC | HRGMv2_2212_16 | HRGMv2_2212_16_6 | 8758 | 9420 | - | 2.A.38.4.2 |
| TC | HRGMv2_2212_16 | HRGMv2_2212_16_7 | 9437 | 10744 | - | 2.A.38.4.1 |
| TC | HRGMv2_2212_16 | HRGMv2_2212_16_8 | 10728 | 12056 | - | 9.A.40.2.2 |
Gene ID: HRGMv2_2212_16_2
Type: CAZyme
Location: 3629 - 5575 (-)
Type: CAZyme
Location: 3629 - 5575 (-)
Gene ID: HRGMv2_2212_16_3
Type: CAZyme
Location: 5621 - 6703 (-)
Type: CAZyme
Location: 5621 - 6703 (-)
Gene ID: HRGMv2_2212_16_4
Type: peptidase
Location: 6917 - 8098 (-)
Type: peptidase
Location: 6917 - 8098 (-)
Gene ID: HRGMv2_2212_16_5
Type: pfam
Location: 8127 - 8603 (-)
Type: pfam
Location: 8127 - 8603 (-)
Gene ID: HRGMv2_2212_16_6
Type: TC
Location: 8758 - 9420 (-)
Type: TC
Location: 8758 - 9420 (-)
Gene ID: HRGMv2_2212_16_7
Type: TC
Location: 9437 - 10744 (-)
Type: TC
Location: 9437 - 10744 (-)
Gene ID: HRGMv2_2212_16_8
Type: TC
Location: 10728 - 12056 (-)
Type: TC
Location: 10728 - 12056 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum soehngenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2212_16_4 | vegan > omnivore | 1.28280 | 0.00782 |
| HRGMv2_2212_16_8 | vegan > omnivore | 1.23578 | 0.00782 |