Cluster: HRGMv2_2212_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2212
- CGC Family ID: CGCFAM_02618
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2212_15 | HRGMv2_2212_15_15 | 13066 | 14391 | - | GH13_20 |
| STP | HRGMv2_2212_15 | HRGMv2_2212_15_16 | 14527 | 14763 | - | PTS-HPr |
| TC | HRGMv2_2212_15 | HRGMv2_2212_15_17 | 15030 | 15821 | + | 3.A.1.3.25 |
| TC | HRGMv2_2212_15 | HRGMv2_2212_15_18 | 15855 | 16523 | + | 3.A.1.3.25 |
| TC | HRGMv2_2212_15 | HRGMv2_2212_15_19 | 16523 | 17266 | + | 3.A.1.3.25 |
Gene ID: HRGMv2_2212_15_15
Type: CAZyme
Location: 13066 - 14391 (-)
Type: CAZyme
Location: 13066 - 14391 (-)
Gene ID: HRGMv2_2212_15_16
Type: STP
Location: 14527 - 14763 (-)
Type: STP
Location: 14527 - 14763 (-)
Gene ID: HRGMv2_2212_15_17
Type: TC
Location: 15030 - 15821 (+)
Type: TC
Location: 15030 - 15821 (+)
Gene ID: HRGMv2_2212_15_18
Type: TC
Location: 15855 - 16523 (+)
Type: TC
Location: 15855 - 16523 (+)
Gene ID: HRGMv2_2212_15_19
Type: TC
Location: 16523 - 17266 (+)
Type: TC
Location: 16523 - 17266 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum soehngenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.