Cluster: HRGMv2_2212_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2212
- CGC Family ID: CGCFAM_00280
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2212_2 | HRGMv2_2212_2_79 | 98872 | 99618 | + | GT2 |
| TC | HRGMv2_2212_2 | HRGMv2_2212_2_80 | 99622 | 102243 | + | 9.B.144.1.5 |
| pfam | HRGMv2_2212_2 | HRGMv2_2212_2_81 | 102352 | 103236 | + | DUF1002 |
| NULL(UNKNOWN) | HRGMv2_2212_2 | HRGMv2_2212_2_82 | 103741 | 104790 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2212_2 | HRGMv2_2212_2_83 | 104774 | 106030 | + | 3.A.7.18.1 |
Gene ID: HRGMv2_2212_2_79
Type: CAZyme
Location: 98872 - 99618 (+)
Type: CAZyme
Location: 98872 - 99618 (+)
Gene ID: HRGMv2_2212_2_80
Type: TC
Location: 99622 - 102243 (+)
Type: TC
Location: 99622 - 102243 (+)
Gene ID: HRGMv2_2212_2_81
Type: pfam
Location: 102352 - 103236 (+)
Type: pfam
Location: 102352 - 103236 (+)
Gene ID: HRGMv2_2212_2_82
Type:
Location: 103741 - 104790 (+)
Type:
Location: 103741 - 104790 (+)
Gene ID: HRGMv2_2212_2_83
Type: TC
Location: 104774 - 106030 (+)
Type: TC
Location: 104774 - 106030 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerobutyricum
Species
Anaerobutyricum soehngenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2212_2_81 | vegan > omnivore | 1.62776 | 0.00782 |