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Cluster: HRGMv2_2211_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2211_2 HRGMv2_2211_2_129 150306 151040 - 9.B.28.1.2
pfam HRGMv2_2211_2 HRGMv2_2211_2_130 151129 151953 - Acetyltransf_1 | Acetyltransf_3
pfam HRGMv2_2211_2 HRGMv2_2211_2_131 152002 152520 - Pro_isomerase
CAZyme HRGMv2_2211_2 HRGMv2_2211_2_132 152646 153767 - GH177
TC HRGMv2_2211_2 HRGMv2_2211_2_133 153822 154655 - 3.A.1.1.25
TC HRGMv2_2211_2 HRGMv2_2211_2_134 154655 155644 - 3.A.1.1.7
Gene ID: HRGMv2_2211_2_129
Type: TC
Location: 150306 - 151040 (-)
Gene ID: HRGMv2_2211_2_130
Type: pfam
Location: 151129 - 151953 (-)
Gene ID: HRGMv2_2211_2_131
Type: pfam
Location: 152002 - 152520 (-)
Gene ID: HRGMv2_2211_2_132
Type: CAZyme
Location: 152646 - 153767 (-)
Gene ID: HRGMv2_2211_2_133
Type: TC
Location: 153822 - 154655 (-)
Gene ID: HRGMv2_2211_2_134
Type: TC
Location: 154655 - 155644 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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