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Cluster: HRGMv2_2211_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2211_1 HRGMv2_2211_1_61 62716 63810 + GH170
TF HRGMv2_2211_1 HRGMv2_2211_1_62 63959 65878 + HTH_11 | Mga
TC HRGMv2_2211_1 HRGMv2_2211_1_63 66018 66356 + 4.A.3.1.3
TC HRGMv2_2211_1 HRGMv2_2211_1_64 66435 66755 + 4.A.3.2.1
TC HRGMv2_2211_1 HRGMv2_2211_1_65 66821 68155 + 4.A.3.2.8
Gene ID: HRGMv2_2211_1_61
Type: CAZyme
Location: 62716 - 63810 (+)
Gene ID: HRGMv2_2211_1_62
Type: TF
Location: 63959 - 65878 (+)
Gene ID: HRGMv2_2211_1_63
Type: TC
Location: 66018 - 66356 (+)
Gene ID: HRGMv2_2211_1_64
Type: TC
Location: 66435 - 66755 (+)
Gene ID: HRGMv2_2211_1_65
Type: TC
Location: 66821 - 68155 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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