Cluster: HRGMv2_2211_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2211
- CGC Family ID: CGCFAM_00977
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2211_28 | HRGMv2_2211_28_1 | 469 | 3540 | - | GH2 |
| TF | HRGMv2_2211_28 | HRGMv2_2211_28_2 | 3729 | 4580 | + | HTH_AraC |
| TC | HRGMv2_2211_28 | HRGMv2_2211_28_3 | 4586 | 5830 | + | 9.B.70.1.1 |
| pfam | HRGMv2_2211_28 | HRGMv2_2211_28_4 | 5821 | 6348 | + | Spore_III_AB |
| pfam | HRGMv2_2211_28 | HRGMv2_2211_28_5 | 6383 | 6577 | + | SpoIIIAC |
| TC | HRGMv2_2211_28 | HRGMv2_2211_28_6 | 6700 | 7086 | + | 9.B.70.1.1 |
Gene ID: HRGMv2_2211_28_1
Type: CAZyme
Location: 469 - 3540 (-)
Type: CAZyme
Location: 469 - 3540 (-)
Gene ID: HRGMv2_2211_28_2
Type: TF
Location: 3729 - 4580 (+)
Type: TF
Location: 3729 - 4580 (+)
Gene ID: HRGMv2_2211_28_3
Type: TC
Location: 4586 - 5830 (+)
Type: TC
Location: 4586 - 5830 (+)
Gene ID: HRGMv2_2211_28_4
Type: pfam
Location: 5821 - 6348 (+)
Type: pfam
Location: 5821 - 6348 (+)
Gene ID: HRGMv2_2211_28_5
Type: pfam
Location: 6383 - 6577 (+)
Type: pfam
Location: 6383 - 6577 (+)
Gene ID: HRGMv2_2211_28_6
Type: TC
Location: 6700 - 7086 (+)
Type: TC
Location: 6700 - 7086 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Enterocloster
Species
Enterocloster porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.