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Cluster: HRGMv2_2211_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2211_8 HRGMv2_2211_8_100 88889 89653 - GT2
pfam HRGMv2_2211_8 HRGMv2_2211_8_101 89840 90808 - NTP_transferase | NTP_transf_3
TC HRGMv2_2211_8 HRGMv2_2211_8_102 90904 92343 - 2.A.66.2.16
NULL(UNKNOWN) HRGMv2_2211_8 HRGMv2_2211_8_103 92343 93314 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2211_8 HRGMv2_2211_8_104 93329 94462 - Glyco_trans_1_4
CAZyme HRGMv2_2211_8 HRGMv2_2211_8_105 94527 95558 + GT2
CAZyme HRGMv2_2211_8 HRGMv2_2211_8_106 95553 96509 - GT2
pfam HRGMv2_2211_8 HRGMv2_2211_8_107 96520 97674 - Glyco_trans_1_4
TC HRGMv2_2211_8 HRGMv2_2211_8_108 97698 99125 - 9.B.18.1.3
Gene ID: HRGMv2_2211_8_100
Type: CAZyme
Location: 88889 - 89653 (-)
Gene ID: HRGMv2_2211_8_101
Type: pfam
Location: 89840 - 90808 (-)
Gene ID: HRGMv2_2211_8_102
Type: TC
Location: 90904 - 92343 (-)
Gene ID: HRGMv2_2211_8_103
Type:
Location: 92343 - 93314 (-)
Gene ID: HRGMv2_2211_8_104
Type: pfam
Location: 93329 - 94462 (-)
Gene ID: HRGMv2_2211_8_105
Type: CAZyme
Location: 94527 - 95558 (+)
Gene ID: HRGMv2_2211_8_106
Type: CAZyme
Location: 95553 - 96509 (-)
Gene ID: HRGMv2_2211_8_107
Type: pfam
Location: 96520 - 97674 (-)
Gene ID: HRGMv2_2211_8_108
Type: TC
Location: 97698 - 99125 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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