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Cluster: HRGMv2_2211_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2211_7 HRGMv2_2211_7_90 103955 104746 - 3.A.1.16.3
TC HRGMv2_2211_7 HRGMv2_2211_7_91 104722 105501 - 3.A.1.17.1
TF HRGMv2_2211_7 HRGMv2_2211_7_92 105828 106907 - LacI
CAZyme HRGMv2_2211_7 HRGMv2_2211_7_93 106967 108439 - GH77
TC HRGMv2_2211_7 HRGMv2_2211_7_94 108476 109321 - 3.A.1.1.45
TC HRGMv2_2211_7 HRGMv2_2211_7_95 109318 110166 - 3.A.1.1.45
TC HRGMv2_2211_7 HRGMv2_2211_7_96 110306 111679 - 3.A.1.1.45
pfam HRGMv2_2211_7 HRGMv2_2211_7_97 112705 113079 + Desulfoferrodox | Desulfoferrod_N
TC HRGMv2_2211_7 HRGMv2_2211_7_98 113251 115110 - 3.A.3.6.16
Gene ID: HRGMv2_2211_7_90
Type: TC
Location: 103955 - 104746 (-)
Gene ID: HRGMv2_2211_7_91
Type: TC
Location: 104722 - 105501 (-)
Gene ID: HRGMv2_2211_7_92
Type: TF
Location: 105828 - 106907 (-)
Gene ID: HRGMv2_2211_7_93
Type: CAZyme
Location: 106967 - 108439 (-)
Gene ID: HRGMv2_2211_7_94
Type: TC
Location: 108476 - 109321 (-)
Gene ID: HRGMv2_2211_7_95
Type: TC
Location: 109318 - 110166 (-)
Gene ID: HRGMv2_2211_7_96
Type: TC
Location: 110306 - 111679 (-)
Gene ID: HRGMv2_2211_7_97
Type: pfam
Location: 112705 - 113079 (+)
Gene ID: HRGMv2_2211_7_98
Type: TC
Location: 113251 - 115110 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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