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Cluster: HRGMv2_2210_CGC70

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2210_3 HRGMv2_2210_3_672 762804 764111 + 2.A.23.1.5
TC HRGMv2_2210_3 HRGMv2_2210_3_673 764534 765019 - 2.A.115.2.14
NULL(UNKNOWN) HRGMv2_2210_3 HRGMv2_2210_3_674 765616 766161 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2210_3 HRGMv2_2210_3_675 766233 768389 + 2.A.6.4.2
pfam HRGMv2_2210_3 HRGMv2_2210_3_676 768537 770264 + LytR_cpsA_psr
TC HRGMv2_2210_3 HRGMv2_2210_3_677 770291 772300 + 9.B.18.2.1
pfam HRGMv2_2210_3 HRGMv2_2210_3_678 772321 773523 + DegT_DnrJ_EryC1
TC HRGMv2_2210_3 HRGMv2_2210_3_679 773701 774396 + 9.B.18.1.3
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_680 774410 775633 + GT4
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_681 775650 776735 + GT2
pfam HRGMv2_2210_3 HRGMv2_2210_3_682 776766 778160 + Wzy_C
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_683 778157 779275 + GT4
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_684 779545 780543 + GT2
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_685 780555 781580 + GT2
TC HRGMv2_2210_3 HRGMv2_2210_3_686 781580 783049 + 2.A.66.2.1
NULL(UNKNOWN) HRGMv2_2210_3 HRGMv2_2210_3_687 783053 784915 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2210_3 HRGMv2_2210_3_688 785003 786322 + UDPG_MGDP_dh | NAD_Gly3P_dh_N | ApbA | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_689 786340 787320 + GT2
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_690 787326 788345 + GT2
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_691 788361 789314 + GT2
Gene ID: HRGMv2_2210_3_672
Type: TC
Location: 762804 - 764111 (+)
Gene ID: HRGMv2_2210_3_673
Type: TC
Location: 764534 - 765019 (-)
Gene ID: HRGMv2_2210_3_674
Type:
Location: 765616 - 766161 (+)
Gene ID: HRGMv2_2210_3_675
Type: TC
Location: 766233 - 768389 (+)
Gene ID: HRGMv2_2210_3_676
Type: pfam
Location: 768537 - 770264 (+)
Gene ID: HRGMv2_2210_3_677
Type: TC
Location: 770291 - 772300 (+)
Gene ID: HRGMv2_2210_3_678
Type: pfam
Location: 772321 - 773523 (+)
Gene ID: HRGMv2_2210_3_679
Type: TC
Location: 773701 - 774396 (+)
Gene ID: HRGMv2_2210_3_680
Type: CAZyme
Location: 774410 - 775633 (+)
Gene ID: HRGMv2_2210_3_681
Type: CAZyme
Location: 775650 - 776735 (+)
Gene ID: HRGMv2_2210_3_682
Type: pfam
Location: 776766 - 778160 (+)
Gene ID: HRGMv2_2210_3_683
Type: CAZyme
Location: 778157 - 779275 (+)
Gene ID: HRGMv2_2210_3_684
Type: CAZyme
Location: 779545 - 780543 (+)
Gene ID: HRGMv2_2210_3_685
Type: CAZyme
Location: 780555 - 781580 (+)
Gene ID: HRGMv2_2210_3_686
Type: TC
Location: 781580 - 783049 (+)
Gene ID: HRGMv2_2210_3_687
Type:
Location: 783053 - 784915 (+)
Gene ID: HRGMv2_2210_3_688
Type: pfam
Location: 785003 - 786322 (+)
Gene ID: HRGMv2_2210_3_689
Type: CAZyme
Location: 786340 - 787320 (+)
Gene ID: HRGMv2_2210_3_690
Type: CAZyme
Location: 787326 - 788345 (+)
Gene ID: HRGMv2_2210_3_691
Type: CAZyme
Location: 788361 - 789314 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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