dbCAN Logo

Cluster: HRGMv2_2210_CGC68

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2210_3 HRGMv2_2210_3_578 657821 658096 + 8.A.8.1.3
pfam HRGMv2_2210_3 HRGMv2_2210_3_579 658135 659049 + NTP_transferase
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_580 659190 660776 + GH25
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_581 660792 661778 + GT2
pfam HRGMv2_2210_3 HRGMv2_2210_3_582 661855 663384 + Glucos_trans_II
TC HRGMv2_2210_3 HRGMv2_2210_3_583 663632 665035 + 9.B.18.1.1
pfam HRGMv2_2210_3 HRGMv2_2210_3_584 665065 666294 + LytR_cpsA_psr
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_585 666306 667223 + GT2
pfam HRGMv2_2210_3 HRGMv2_2210_3_586 667319 668644 + LytR_cpsA_psr
NULL(UNKNOWN) HRGMv2_2210_3 HRGMv2_2210_3_587 668669 670096 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2210_3 HRGMv2_2210_3_588 670312 671088 + 3.A.1.103.6
TC HRGMv2_2210_3 HRGMv2_2210_3_589 671098 671835 + 3.A.1.103.1
NULL(UNKNOWN) HRGMv2_2210_3 HRGMv2_2210_3_590 671855 672448 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_591 672474 674963 + GT2 | GT2
Gene ID: HRGMv2_2210_3_578
Type: TC
Location: 657821 - 658096 (+)
Gene ID: HRGMv2_2210_3_579
Type: pfam
Location: 658135 - 659049 (+)
Gene ID: HRGMv2_2210_3_580
Type: CAZyme
Location: 659190 - 660776 (+)
Gene ID: HRGMv2_2210_3_581
Type: CAZyme
Location: 660792 - 661778 (+)
Gene ID: HRGMv2_2210_3_582
Type: pfam
Location: 661855 - 663384 (+)
Gene ID: HRGMv2_2210_3_583
Type: TC
Location: 663632 - 665035 (+)
Gene ID: HRGMv2_2210_3_584
Type: pfam
Location: 665065 - 666294 (+)
Gene ID: HRGMv2_2210_3_585
Type: CAZyme
Location: 666306 - 667223 (+)
Gene ID: HRGMv2_2210_3_586
Type: pfam
Location: 667319 - 668644 (+)
Gene ID: HRGMv2_2210_3_587
Type:
Location: 668669 - 670096 (+)
Gene ID: HRGMv2_2210_3_588
Type: TC
Location: 670312 - 671088 (+)
Gene ID: HRGMv2_2210_3_589
Type: TC
Location: 671098 - 671835 (+)
Gene ID: HRGMv2_2210_3_590
Type:
Location: 671855 - 672448 (+)
Gene ID: HRGMv2_2210_3_591
Type: CAZyme
Location: 672474 - 674963 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List