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Cluster: HRGMv2_2210_CGC67

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2210_3 HRGMv2_2210_3_486 545722 547068 + 2.A.66.1.7
TF HRGMv2_2210_3 HRGMv2_2210_3_487 547099 547869 + HTH_6
TC HRGMv2_2210_3 HRGMv2_2210_3_488 548094 549707 + 4.A.1.1.8
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_489 549759 551087 + GH4
pfam HRGMv2_2210_3 HRGMv2_2210_3_490 551205 553304 - FtsX
TC HRGMv2_2210_3 HRGMv2_2210_3_491 553291 554049 - 3.A.1.134.12
Gene ID: HRGMv2_2210_3_486
Type: TC
Location: 545722 - 547068 (+)
Gene ID: HRGMv2_2210_3_487
Type: TF
Location: 547099 - 547869 (+)
Gene ID: HRGMv2_2210_3_488
Type: TC
Location: 548094 - 549707 (+)
Gene ID: HRGMv2_2210_3_489
Type: CAZyme
Location: 549759 - 551087 (+)
Gene ID: HRGMv2_2210_3_490
Type: pfam
Location: 551205 - 553304 (-)
Gene ID: HRGMv2_2210_3_491
Type: TC
Location: 553291 - 554049 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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