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Cluster: HRGMv2_2210_CGC65

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_245 275282 276808 - GH142
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_246 276801 277754 - GH137
TC HRGMv2_2210_3 HRGMv2_2210_3_247 277767 278609 - 3.A.1.1.41
TC HRGMv2_2210_3 HRGMv2_2210_3_248 278614 279480 - 3.A.1.1.34
STP HRGMv2_2210_3 HRGMv2_2210_3_249 279624 280964 - SBP_bac_1
STP HRGMv2_2210_3 HRGMv2_2210_3_250 281276 281842 - Response_reg
TC HRGMv2_2210_3 HRGMv2_2210_3_251 281826 283646 - 8.A.59.2.1
TC HRGMv2_2210_3 HRGMv2_2210_3_252 283758 284126 - 9.B.143.3.6
Gene ID: HRGMv2_2210_3_245
Type: CAZyme
Location: 275282 - 276808 (-)
Gene ID: HRGMv2_2210_3_246
Type: CAZyme
Location: 276801 - 277754 (-)
Gene ID: HRGMv2_2210_3_247
Type: TC
Location: 277767 - 278609 (-)
Gene ID: HRGMv2_2210_3_248
Type: TC
Location: 278614 - 279480 (-)
Gene ID: HRGMv2_2210_3_249
Type: STP
Location: 279624 - 280964 (-)
Gene ID: HRGMv2_2210_3_250
Type: STP
Location: 281276 - 281842 (-)
Gene ID: HRGMv2_2210_3_251
Type: TC
Location: 281826 - 283646 (-)
Gene ID: HRGMv2_2210_3_252
Type: TC
Location: 283758 - 284126 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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