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Cluster: HRGMv2_2210_CGC62

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2210_3 HRGMv2_2210_3_154 180477 181172 - 3.A.1.134.11
NULL(UNKNOWN) HRGMv2_2210_3 HRGMv2_2210_3_155 181277 181681 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2210_3 HRGMv2_2210_3_156 181684 182127 - LytTR
CAZyme HRGMv2_2210_3 HRGMv2_2210_3_157 182480 185602 - GH106
TF HRGMv2_2210_3 HRGMv2_2210_3_158 185589 187118 - HTH_AraC | HTH_AraC
TC HRGMv2_2210_3 HRGMv2_2210_3_159 187106 188920 - 9.B.33.1.1
TC HRGMv2_2210_3 HRGMv2_2210_3_160 189071 189901 - 3.A.1.1.41
TC HRGMv2_2210_3 HRGMv2_2210_3_161 189903 190760 - 3.A.1.1.7
Gene ID: HRGMv2_2210_3_154
Type: TC
Location: 180477 - 181172 (-)
Gene ID: HRGMv2_2210_3_155
Type:
Location: 181277 - 181681 (-)
Gene ID: HRGMv2_2210_3_156
Type: TF
Location: 181684 - 182127 (-)
Gene ID: HRGMv2_2210_3_157
Type: CAZyme
Location: 182480 - 185602 (-)
Gene ID: HRGMv2_2210_3_158
Type: TF
Location: 185589 - 187118 (-)
Gene ID: HRGMv2_2210_3_159
Type: TC
Location: 187106 - 188920 (-)
Gene ID: HRGMv2_2210_3_160
Type: TC
Location: 189071 - 189901 (-)
Gene ID: HRGMv2_2210_3_161
Type: TC
Location: 189903 - 190760 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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