Cluster: HRGMv2_2210_CGC59
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2210
- CGC Family ID: CGCFAM_00010
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_3065 | 3634149 | 3636401 | + | GT35 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_3066 | 3636747 | 3638108 | + | 3.A.1.1.45 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_3067 | 3638178 | 3639020 | + | 3.A.1.1.45 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_3068 | 3639020 | 3639892 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_3069 | 3639910 | 3641391 | + | GH77 |
| TF | HRGMv2_2210_1 | HRGMv2_2210_1_3070 | 3641527 | 3642558 | + | LacI |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_3071 | 3643143 | 3643817 | - | 9.B.20.1.4 |
Gene ID: HRGMv2_2210_1_3065
Type: CAZyme
Location: 3634149 - 3636401 (+)
Type: CAZyme
Location: 3634149 - 3636401 (+)
Gene ID: HRGMv2_2210_1_3066
Type: TC
Location: 3636747 - 3638108 (+)
Type: TC
Location: 3636747 - 3638108 (+)
Gene ID: HRGMv2_2210_1_3067
Type: TC
Location: 3638178 - 3639020 (+)
Type: TC
Location: 3638178 - 3639020 (+)
Gene ID: HRGMv2_2210_1_3068
Type: TC
Location: 3639020 - 3639892 (+)
Type: TC
Location: 3639020 - 3639892 (+)
Gene ID: HRGMv2_2210_1_3069
Type: CAZyme
Location: 3639910 - 3641391 (+)
Type: CAZyme
Location: 3639910 - 3641391 (+)
Gene ID: HRGMv2_2210_1_3070
Type: TF
Location: 3641527 - 3642558 (+)
Type: TF
Location: 3641527 - 3642558 (+)
Gene ID: HRGMv2_2210_1_3071
Type: TC
Location: 3643143 - 3643817 (-)
Type: TC
Location: 3643143 - 3643817 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.