Cluster: HRGMv2_2210_CGC54
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2210
- CGC Family ID: CGCFAM_08121
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2668 | 3158885 | 3160291 | + | GH29 |
| STP | HRGMv2_2210_1 | HRGMv2_2210_1_2669 | 3160304 | 3161644 | + | SBP_bac_1 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2670 | 3161763 | 3162785 | + | 3.A.1.1.21 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2671 | 3162787 | 3163590 | + | 3.A.1.1.18 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2672 | 3163587 | 3164951 | + | GH28 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2673 | 3164977 | 3166311 | + | GH28 |
Gene ID: HRGMv2_2210_1_2668
Type: CAZyme
Location: 3158885 - 3160291 (+)
Type: CAZyme
Location: 3158885 - 3160291 (+)
Gene ID: HRGMv2_2210_1_2669
Type: STP
Location: 3160304 - 3161644 (+)
Type: STP
Location: 3160304 - 3161644 (+)
Gene ID: HRGMv2_2210_1_2670
Type: TC
Location: 3161763 - 3162785 (+)
Type: TC
Location: 3161763 - 3162785 (+)
Gene ID: HRGMv2_2210_1_2671
Type: TC
Location: 3162787 - 3163590 (+)
Type: TC
Location: 3162787 - 3163590 (+)
Gene ID: HRGMv2_2210_1_2672
Type: CAZyme
Location: 3163587 - 3164951 (+)
Type: CAZyme
Location: 3163587 - 3164951 (+)
Gene ID: HRGMv2_2210_1_2673
Type: CAZyme
Location: 3164977 - 3166311 (+)
Type: CAZyme
Location: 3164977 - 3166311 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.