Cluster: HRGMv2_2210_CGC52
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2210
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2599 | 3074887 | 3075759 | + | 3.A.1.1.20 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2600 | 3075759 | 3076592 | + | 3.A.1.1.34 |
| STP | HRGMv2_2210_1 | HRGMv2_2210_1_2601 | 3076639 | 3078444 | + | HATPase_c | dCache_1 |
| TF | HRGMv2_2210_1 | HRGMv2_2210_1_2602 | 3078520 | 3080040 | + | HTH_AraC |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2603 | 3080255 | 3082711 | + | GH95 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2604 | 3082863 | 3084806 | + | GH127 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2605 | 3084819 | 3086327 | + | CBM91 | GH43_12 |
Gene ID: HRGMv2_2210_1_2599
Type: TC
Location: 3074887 - 3075759 (+)
Type: TC
Location: 3074887 - 3075759 (+)
Gene ID: HRGMv2_2210_1_2600
Type: TC
Location: 3075759 - 3076592 (+)
Type: TC
Location: 3075759 - 3076592 (+)
Gene ID: HRGMv2_2210_1_2601
Type: STP
Location: 3076639 - 3078444 (+)
Type: STP
Location: 3076639 - 3078444 (+)
Gene ID: HRGMv2_2210_1_2602
Type: TF
Location: 3078520 - 3080040 (+)
Type: TF
Location: 3078520 - 3080040 (+)
Gene ID: HRGMv2_2210_1_2603
Type: CAZyme
Location: 3080255 - 3082711 (+)
Type: CAZyme
Location: 3080255 - 3082711 (+)
Gene ID: HRGMv2_2210_1_2604
Type: CAZyme
Location: 3082863 - 3084806 (+)
Type: CAZyme
Location: 3082863 - 3084806 (+)
Gene ID: HRGMv2_2210_1_2605
Type: CAZyme
Location: 3084819 - 3086327 (+)
Type: CAZyme
Location: 3084819 - 3086327 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.