Cluster: HRGMv2_2210_CGC51
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2210
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2540 | 3003466 | 3004077 | + | 9.B.28.1.3 |
| NULL(UNKNOWN) | HRGMv2_2210_1 | HRGMv2_2210_1_2541 | 3004167 | 3005108 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2542 | 3005105 | 3006796 | + | GH13_18 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2543 | 3006812 | 3007684 | + | CE1 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2544 | 3007717 | 3008679 | + | GH109 |
Gene ID: HRGMv2_2210_1_2540
Type: TC
Location: 3003466 - 3004077 (+)
Type: TC
Location: 3003466 - 3004077 (+)
Gene ID: HRGMv2_2210_1_2541
Type:
Location: 3004167 - 3005108 (+)
Type:
Location: 3004167 - 3005108 (+)
Gene ID: HRGMv2_2210_1_2542
Type: CAZyme
Location: 3005105 - 3006796 (+)
Type: CAZyme
Location: 3005105 - 3006796 (+)
Gene ID: HRGMv2_2210_1_2543
Type: CAZyme
Location: 3006812 - 3007684 (+)
Type: CAZyme
Location: 3006812 - 3007684 (+)
Gene ID: HRGMv2_2210_1_2544
Type: CAZyme
Location: 3007717 - 3008679 (+)
Type: CAZyme
Location: 3007717 - 3008679 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.