Cluster: HRGMv2_2210_CGC50
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2210
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2530 | 2990246 | 2991706 | - | GH13_18 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2531 | 2991720 | 2992601 | - | 3.A.1.1.29 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2532 | 2992620 | 2993567 | - | 3.A.1.1.10 |
| pfam | HRGMv2_2210_1 | HRGMv2_2210_1_2533 | 2993989 | 2995518 | + | DUF3502 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2534 | 2995726 | 2996928 | + | 2.A.1.46.5 |
| peptidase | HRGMv2_2210_1 | HRGMv2_2210_1_2535 | 2996915 | 2998435 | + | S12.UPW |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2536 | 2998432 | 2999787 | + | 2.A.66.1.28 |
Gene ID: HRGMv2_2210_1_2530
Type: CAZyme
Location: 2990246 - 2991706 (-)
Type: CAZyme
Location: 2990246 - 2991706 (-)
Gene ID: HRGMv2_2210_1_2531
Type: TC
Location: 2991720 - 2992601 (-)
Type: TC
Location: 2991720 - 2992601 (-)
Gene ID: HRGMv2_2210_1_2532
Type: TC
Location: 2992620 - 2993567 (-)
Type: TC
Location: 2992620 - 2993567 (-)
Gene ID: HRGMv2_2210_1_2533
Type: pfam
Location: 2993989 - 2995518 (+)
Type: pfam
Location: 2993989 - 2995518 (+)
Gene ID: HRGMv2_2210_1_2534
Type: TC
Location: 2995726 - 2996928 (+)
Type: TC
Location: 2995726 - 2996928 (+)
Gene ID: HRGMv2_2210_1_2535
Type: peptidase
Location: 2996915 - 2998435 (+)
Type: peptidase
Location: 2996915 - 2998435 (+)
Gene ID: HRGMv2_2210_1_2536
Type: TC
Location: 2998432 - 2999787 (+)
Type: TC
Location: 2998432 - 2999787 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.