dbCAN HGM

Cluster: HRGMv2_2210_CGC48

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2210_1	HRGMv2_2210_1_2412	2844988	2846034	+	GH117 \| GH117
STP	HRGMv2_2210_1	HRGMv2_2210_1_2413	2846271	2847797	+	SBP_bac_1
STP	HRGMv2_2210_1	HRGMv2_2210_1_2414	2848170	2849702	+	SBP_bac_1
TC	HRGMv2_2210_1	HRGMv2_2210_1_2415	2849894	2850835	+	3.A.1.1.10
TC	HRGMv2_2210_1	HRGMv2_2210_1_2416	2850849	2851724	+	3.A.1.1.10
sulfatase	HRGMv2_2210_1	HRGMv2_2210_1_2417	2851740	2853260	+	S1_11
CAZyme	HRGMv2_2210_1	HRGMv2_2210_1_2418	2853245	2856028	+	GH2
TF	HRGMv2_2210_1	HRGMv2_2210_1_2419	2856101	2856796	-	GntR
TC	HRGMv2_2210_1	HRGMv2_2210_1_2420	2857028	2858806	+	3.A.1.106.2
CAZyme	HRGMv2_2210_1	HRGMv2_2210_1_2421	2858951	2860012	+	GH117 \| GH117
CAZyme	HRGMv2_2210_1	HRGMv2_2210_1_2422	2860103	2862553	+	GH2

Gene ID: HRGMv2_2210_1_2412
Type: CAZyme
Location: 2844988 - 2846034 (+)

Gene ID: HRGMv2_2210_1_2413
Type: STP
Location: 2846271 - 2847797 (+)

Gene ID: HRGMv2_2210_1_2414
Type: STP
Location: 2848170 - 2849702 (+)

Gene ID: HRGMv2_2210_1_2415
Type: TC
Location: 2849894 - 2850835 (+)

Gene ID: HRGMv2_2210_1_2416
Type: TC
Location: 2850849 - 2851724 (+)

Gene ID: HRGMv2_2210_1_2417
Type: sulfatase
Location: 2851740 - 2853260 (+)

Gene ID: HRGMv2_2210_1_2418
Type: CAZyme
Location: 2853245 - 2856028 (+)

Gene ID: HRGMv2_2210_1_2419
Type: TF
Location: 2856101 - 2856796 (-)

Gene ID: HRGMv2_2210_1_2420
Type: TC
Location: 2857028 - 2858806 (+)

Gene ID: HRGMv2_2210_1_2421
Type: CAZyme
Location: 2858951 - 2860012 (+)

Gene ID: HRGMv2_2210_1_2422
Type: CAZyme
Location: 2860103 - 2862553 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.