Cluster: HRGMv2_2210_CGC46
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2210
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2367 | 2781696 | 2783561 | + | GH127 |
| pfam | HRGMv2_2210_1 | HRGMv2_2210_1_2368 | 2783711 | 2785492 | + | FAD_binding_2 | FAD_oxidored | NAD_binding_8 |
| pfam | HRGMv2_2210_1 | HRGMv2_2210_1_2369 | 2785782 | 2786927 | + | MR_MLE_N | MR_MLE_C |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2370 | 2786939 | 2787835 | + | 3.A.1.1.36 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2371 | 2787847 | 2788671 | + | 3.A.1.1.11 |
Gene ID: HRGMv2_2210_1_2367
Type: CAZyme
Location: 2781696 - 2783561 (+)
Type: CAZyme
Location: 2781696 - 2783561 (+)
Gene ID: HRGMv2_2210_1_2368
Type: pfam
Location: 2783711 - 2785492 (+)
Type: pfam
Location: 2783711 - 2785492 (+)
Gene ID: HRGMv2_2210_1_2369
Type: pfam
Location: 2785782 - 2786927 (+)
Type: pfam
Location: 2785782 - 2786927 (+)
Gene ID: HRGMv2_2210_1_2370
Type: TC
Location: 2786939 - 2787835 (+)
Type: TC
Location: 2786939 - 2787835 (+)
Gene ID: HRGMv2_2210_1_2371
Type: TC
Location: 2787847 - 2788671 (+)
Type: TC
Location: 2787847 - 2788671 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.