Cluster: HRGMv2_2210_CGC42
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2210
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2301 | 2694070 | 2695665 | + | 2.A.15.2.2 |
| pfam | HRGMv2_2210_1 | HRGMv2_2210_1_2302 | 2695700 | 2696863 | + | MR_MLE_N | MR_MLE_C |
| NULL(UNKNOWN) | HRGMv2_2210_1 | HRGMv2_2210_1_2303 | 2696971 | 2697096 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2304 | 2697159 | 2698613 | - | GH29 |
| TF | HRGMv2_2210_1 | HRGMv2_2210_1_2305 | 2699003 | 2699872 | - | HTH_1 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2306 | 2700014 | 2700802 | + | 2.A.102.4.4 |
Gene ID: HRGMv2_2210_1_2301
Type: TC
Location: 2694070 - 2695665 (+)
Type: TC
Location: 2694070 - 2695665 (+)
Gene ID: HRGMv2_2210_1_2302
Type: pfam
Location: 2695700 - 2696863 (+)
Type: pfam
Location: 2695700 - 2696863 (+)
Gene ID: HRGMv2_2210_1_2303
Type:
Location: 2696971 - 2697096 (+)
Type:
Location: 2696971 - 2697096 (+)
Gene ID: HRGMv2_2210_1_2304
Type: CAZyme
Location: 2697159 - 2698613 (-)
Type: CAZyme
Location: 2697159 - 2698613 (-)
Gene ID: HRGMv2_2210_1_2305
Type: TF
Location: 2699003 - 2699872 (-)
Type: TF
Location: 2699003 - 2699872 (-)
Gene ID: HRGMv2_2210_1_2306
Type: TC
Location: 2700014 - 2700802 (+)
Type: TC
Location: 2700014 - 2700802 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.