Cluster: HRGMv2_2210_CGC41
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2210
- CGC Family ID: CGCFAM_03029
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2252 | 2634303 | 2635805 | + | 3.A.1.2.3 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2253 | 2635795 | 2636751 | + | 3.A.1.2.15 |
| STP | HRGMv2_2210_1 | HRGMv2_2210_1_2254 | 2636776 | 2637744 | + | Peripla_BP_3 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2255 | 2637798 | 2640227 | + | GH3 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2256 | 2640224 | 2642587 | + | GH31_3 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2257 | 2643019 | 2643981 | + | 3.A.25.2.1 |
Gene ID: HRGMv2_2210_1_2252
Type: TC
Location: 2634303 - 2635805 (+)
Type: TC
Location: 2634303 - 2635805 (+)
Gene ID: HRGMv2_2210_1_2253
Type: TC
Location: 2635795 - 2636751 (+)
Type: TC
Location: 2635795 - 2636751 (+)
Gene ID: HRGMv2_2210_1_2254
Type: STP
Location: 2636776 - 2637744 (+)
Type: STP
Location: 2636776 - 2637744 (+)
Gene ID: HRGMv2_2210_1_2255
Type: CAZyme
Location: 2637798 - 2640227 (+)
Type: CAZyme
Location: 2637798 - 2640227 (+)
Gene ID: HRGMv2_2210_1_2256
Type: CAZyme
Location: 2640224 - 2642587 (+)
Type: CAZyme
Location: 2640224 - 2642587 (+)
Gene ID: HRGMv2_2210_1_2257
Type: TC
Location: 2643019 - 2643981 (+)
Type: TC
Location: 2643019 - 2643981 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.