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Cluster: HRGMv2_2210_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2210_1 HRGMv2_2210_1_147 170308 171444 - 3.A.11.1.2
pfam HRGMv2_2210_1 HRGMv2_2210_1_148 171585 171902 - YbjQ_1
NULL(UNKNOWN) HRGMv2_2210_1 HRGMv2_2210_1_149 171883 172110 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2210_1 HRGMv2_2210_1_150 172110 172742 - 2.A.115.2.14
STP HRGMv2_2210_1 HRGMv2_2210_1_151 173001 174911 - EAL | GGDEF
TC HRGMv2_2210_1 HRGMv2_2210_1_152 175266 176162 + 2.A.115.1.1
TC HRGMv2_2210_1 HRGMv2_2210_1_153 176327 177712 - 2.A.66.1.33
CAZyme HRGMv2_2210_1 HRGMv2_2210_1_154 177985 180399 - GH3
pfam HRGMv2_2210_1 HRGMv2_2210_1_155 180419 181255 - Lactamase_B
TC HRGMv2_2210_1 HRGMv2_2210_1_156 181268 182269 - 3.A.1.2.15
TC HRGMv2_2210_1 HRGMv2_2210_1_157 182341 183819 - 3.A.1.2.20
pfam HRGMv2_2210_1 HRGMv2_2210_1_158 183947 184984 - Peripla_BP_4
pfam HRGMv2_2210_1 HRGMv2_2210_1_159 185085 186479 - ABC_tran
TC HRGMv2_2210_1 HRGMv2_2210_1_160 186492 187433 - 8.A.59.2.1
Gene ID: HRGMv2_2210_1_147
Type: TC
Location: 170308 - 171444 (-)
Gene ID: HRGMv2_2210_1_148
Type: pfam
Location: 171585 - 171902 (-)
Gene ID: HRGMv2_2210_1_149
Type:
Location: 171883 - 172110 (-)
Gene ID: HRGMv2_2210_1_150
Type: TC
Location: 172110 - 172742 (-)
Gene ID: HRGMv2_2210_1_151
Type: STP
Location: 173001 - 174911 (-)
Gene ID: HRGMv2_2210_1_152
Type: TC
Location: 175266 - 176162 (+)
Gene ID: HRGMv2_2210_1_153
Type: TC
Location: 176327 - 177712 (-)
Gene ID: HRGMv2_2210_1_154
Type: CAZyme
Location: 177985 - 180399 (-)
Gene ID: HRGMv2_2210_1_155
Type: pfam
Location: 180419 - 181255 (-)
Gene ID: HRGMv2_2210_1_156
Type: TC
Location: 181268 - 182269 (-)
Gene ID: HRGMv2_2210_1_157
Type: TC
Location: 182341 - 183819 (-)
Gene ID: HRGMv2_2210_1_158
Type: pfam
Location: 183947 - 184984 (-)
Gene ID: HRGMv2_2210_1_159
Type: pfam
Location: 185085 - 186479 (-)
Gene ID: HRGMv2_2210_1_160
Type: TC
Location: 186492 - 187433 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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