Cluster: HRGMv2_2210_CGC39
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2210
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2203 | 2574871 | 2577024 | - | GH112 |
| TF | HRGMv2_2210_1 | HRGMv2_2210_1_2204 | 2577249 | 2578196 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_2210_1 | HRGMv2_2210_1_2205 | 2578765 | 2579364 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2206 | 2579376 | 2581520 | + | 3.A.1.112.9 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2207 | 2581532 | 2583706 | + | 3.A.1.109.2 |
Gene ID: HRGMv2_2210_1_2203
Type: CAZyme
Location: 2574871 - 2577024 (-)
Type: CAZyme
Location: 2574871 - 2577024 (-)
Gene ID: HRGMv2_2210_1_2204
Type: TF
Location: 2577249 - 2578196 (+)
Type: TF
Location: 2577249 - 2578196 (+)
Gene ID: HRGMv2_2210_1_2205
Type:
Location: 2578765 - 2579364 (+)
Type:
Location: 2578765 - 2579364 (+)
Gene ID: HRGMv2_2210_1_2206
Type: TC
Location: 2579376 - 2581520 (+)
Type: TC
Location: 2579376 - 2581520 (+)
Gene ID: HRGMv2_2210_1_2207
Type: TC
Location: 2581532 - 2583706 (+)
Type: TC
Location: 2581532 - 2583706 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.