Cluster: HRGMv2_2210_CGC38
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2210
- CGC Family ID: CGCFAM_00506
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_2137 | 2494329 | 2495447 | + | CE9 |
| NULL(UNKNOWN) | HRGMv2_2210_1 | HRGMv2_2210_1_2138 | 2495444 | 2496484 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2210_1 | HRGMv2_2210_1_2139 | 2496856 | 2497692 | + | PRD | PRD | CAT_RBD |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2140 | 2497707 | 2498192 | + | 4.A.1.2.11 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_2141 | 2498285 | 2499724 | + | 4.A.1.1.7 |
Gene ID: HRGMv2_2210_1_2137
Type: CAZyme
Location: 2494329 - 2495447 (+)
Type: CAZyme
Location: 2494329 - 2495447 (+)
Gene ID: HRGMv2_2210_1_2138
Type:
Location: 2495444 - 2496484 (+)
Type:
Location: 2495444 - 2496484 (+)
Gene ID: HRGMv2_2210_1_2139
Type: pfam
Location: 2496856 - 2497692 (+)
Type: pfam
Location: 2496856 - 2497692 (+)
Gene ID: HRGMv2_2210_1_2140
Type: TC
Location: 2497707 - 2498192 (+)
Type: TC
Location: 2497707 - 2498192 (+)
Gene ID: HRGMv2_2210_1_2141
Type: TC
Location: 2498285 - 2499724 (+)
Type: TC
Location: 2498285 - 2499724 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.