Cluster: HRGMv2_2210_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2210
- CGC Family ID: CGCFAM_00682
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_1863 | 2188512 | 2190869 | - | GH65 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_1864 | 2191173 | 2193620 | + | GH16_24 |
| STP | HRGMv2_2210_1 | HRGMv2_2210_1_1865 | 2193922 | 2195163 | + | SBP_bac_1 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1866 | 2195246 | 2196163 | + | 3.A.1.1.20 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1867 | 2196177 | 2196989 | + | 3.A.1.1.34 |
Gene ID: HRGMv2_2210_1_1863
Type: CAZyme
Location: 2188512 - 2190869 (-)
Type: CAZyme
Location: 2188512 - 2190869 (-)
Gene ID: HRGMv2_2210_1_1864
Type: CAZyme
Location: 2191173 - 2193620 (+)
Type: CAZyme
Location: 2191173 - 2193620 (+)
Gene ID: HRGMv2_2210_1_1865
Type: STP
Location: 2193922 - 2195163 (+)
Type: STP
Location: 2193922 - 2195163 (+)
Gene ID: HRGMv2_2210_1_1866
Type: TC
Location: 2195246 - 2196163 (+)
Type: TC
Location: 2195246 - 2196163 (+)
Gene ID: HRGMv2_2210_1_1867
Type: TC
Location: 2196177 - 2196989 (+)
Type: TC
Location: 2196177 - 2196989 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.