Cluster: HRGMv2_2210_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2210
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1518 | 1798641 | 1800461 | + | 3.A.25.1.1 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_1519 | 1800521 | 1802566 | + | GH13_39 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_1520 | 1802582 | 1804390 | + | GH2 |
| STP | HRGMv2_2210_1 | HRGMv2_2210_1_1521 | 1804888 | 1806207 | + | SBP_bac_1 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1522 | 1806340 | 1807221 | + | 3.A.1.1.7 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1523 | 1807225 | 1808061 | + | 3.A.1.1.25 |
Gene ID: HRGMv2_2210_1_1518
Type: TC
Location: 1798641 - 1800461 (+)
Type: TC
Location: 1798641 - 1800461 (+)
Gene ID: HRGMv2_2210_1_1519
Type: CAZyme
Location: 1800521 - 1802566 (+)
Type: CAZyme
Location: 1800521 - 1802566 (+)
Gene ID: HRGMv2_2210_1_1520
Type: CAZyme
Location: 1802582 - 1804390 (+)
Type: CAZyme
Location: 1802582 - 1804390 (+)
Gene ID: HRGMv2_2210_1_1521
Type: STP
Location: 1804888 - 1806207 (+)
Type: STP
Location: 1804888 - 1806207 (+)
Gene ID: HRGMv2_2210_1_1522
Type: TC
Location: 1806340 - 1807221 (+)
Type: TC
Location: 1806340 - 1807221 (+)
Gene ID: HRGMv2_2210_1_1523
Type: TC
Location: 1807225 - 1808061 (+)
Type: TC
Location: 1807225 - 1808061 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.