Cluster: HRGMv2_2210_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2210
- CGC Family ID: CGCFAM_03468
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1473 | 1750771 | 1752534 | - | 8.A.59.2.1 |
| STP | HRGMv2_2210_1 | HRGMv2_2210_1_1474 | 1752842 | 1754188 | + | SBP_bac_1 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1475 | 1754315 | 1755205 | + | 3.A.1.1.42 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1476 | 1755221 | 1756039 | + | 3.A.1.1.18 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_1477 | 1756079 | 1758148 | + | GH151 |
| pfam | HRGMv2_2210_1 | HRGMv2_2210_1_1478 | 1758224 | 1758862 | + | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_1479 | 1759137 | 1760105 | - | CBM50 | GH25 |
Gene ID: HRGMv2_2210_1_1473
Type: TC
Location: 1750771 - 1752534 (-)
Type: TC
Location: 1750771 - 1752534 (-)
Gene ID: HRGMv2_2210_1_1474
Type: STP
Location: 1752842 - 1754188 (+)
Type: STP
Location: 1752842 - 1754188 (+)
Gene ID: HRGMv2_2210_1_1475
Type: TC
Location: 1754315 - 1755205 (+)
Type: TC
Location: 1754315 - 1755205 (+)
Gene ID: HRGMv2_2210_1_1476
Type: TC
Location: 1755221 - 1756039 (+)
Type: TC
Location: 1755221 - 1756039 (+)
Gene ID: HRGMv2_2210_1_1477
Type: CAZyme
Location: 1756079 - 1758148 (+)
Type: CAZyme
Location: 1756079 - 1758148 (+)
Gene ID: HRGMv2_2210_1_1478
Type: pfam
Location: 1758224 - 1758862 (+)
Type: pfam
Location: 1758224 - 1758862 (+)
Gene ID: HRGMv2_2210_1_1479
Type: CAZyme
Location: 1759137 - 1760105 (-)
Type: CAZyme
Location: 1759137 - 1760105 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.