dbCAN HGM

Cluster: HRGMv2_2210_CGC23

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2210_1	HRGMv2_2210_1_1133	1360172	1361554	-	2.A.66.1.25
pfam	HRGMv2_2210_1	HRGMv2_2210_1_1134	1361716	1362918	-	MFS_1 \| MFS_1 \| MFS_1_like
CAZyme	HRGMv2_2210_1	HRGMv2_2210_1_1135	1362933	1364099	-	CE1
TF	HRGMv2_2210_1	HRGMv2_2210_1_1136	1364245	1365843	-	HTH_AraC \| HTH_AraC
TC	HRGMv2_2210_1	HRGMv2_2210_1_1137	1366387	1367325	-	3.A.1.5.15
TC	HRGMv2_2210_1	HRGMv2_2210_1_1138	1367318	1368310	-	3.A.1.5.35
TC	HRGMv2_2210_1	HRGMv2_2210_1_1139	1368329	1369201	-	3.A.1.5.38
TC	HRGMv2_2210_1	HRGMv2_2210_1_1140	1369198	1370148	-	3.A.1.5.3
TC	HRGMv2_2210_1	HRGMv2_2210_1_1141	1370251	1371858	-	3.A.1.5.3

Gene ID: HRGMv2_2210_1_1133
Type: TC
Location: 1360172 - 1361554 (-)

Gene ID: HRGMv2_2210_1_1134
Type: pfam
Location: 1361716 - 1362918 (-)

Gene ID: HRGMv2_2210_1_1135
Type: CAZyme
Location: 1362933 - 1364099 (-)

Gene ID: HRGMv2_2210_1_1136
Type: TF
Location: 1364245 - 1365843 (-)

Gene ID: HRGMv2_2210_1_1137
Type: TC
Location: 1366387 - 1367325 (-)

Gene ID: HRGMv2_2210_1_1138
Type: TC
Location: 1367318 - 1368310 (-)

Gene ID: HRGMv2_2210_1_1139
Type: TC
Location: 1368329 - 1369201 (-)

Gene ID: HRGMv2_2210_1_1140
Type: TC
Location: 1369198 - 1370148 (-)

Gene ID: HRGMv2_2210_1_1141
Type: TC
Location: 1370251 - 1371858 (-)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.