dbCAN HGM

Cluster: HRGMv2_2210_CGC22

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2210_1	HRGMv2_2210_1_1091	1302308	1304074	+	3.A.2.3.2
TC	HRGMv2_2210_1	HRGMv2_2210_1_1092	1304091	1305458	+	3.A.2.3.3
TC	HRGMv2_2210_1	HRGMv2_2210_1_1093	1305527	1306153	+	3.A.2.3.2
CAZyme	HRGMv2_2210_1	HRGMv2_2210_1_1094	1306270	1311390	-	GH95
pfam	HRGMv2_2210_1	HRGMv2_2210_1_1095	1311458	1312525	-	URO-D
TC	HRGMv2_2210_1	HRGMv2_2210_1_1096	1312610	1313416	-	3.A.1.1.4
TC	HRGMv2_2210_1	HRGMv2_2210_1_1097	1313409	1314305	-	3.A.1.1.4
TC	HRGMv2_2210_1	HRGMv2_2210_1_1098	1314380	1315699	-	3.A.1.1.4
TF	HRGMv2_2210_1	HRGMv2_2210_1_1099	1316210	1317136	-	HTH_AraC \| HTH_AraC
CAZyme	HRGMv2_2210_1	HRGMv2_2210_1_1100	1317259	1319184	-	CBM48 \| GH13_9

Gene ID: HRGMv2_2210_1_1091
Type: TC
Location: 1302308 - 1304074 (+)

Gene ID: HRGMv2_2210_1_1092
Type: TC
Location: 1304091 - 1305458 (+)

Gene ID: HRGMv2_2210_1_1093
Type: TC
Location: 1305527 - 1306153 (+)

Gene ID: HRGMv2_2210_1_1094
Type: CAZyme
Location: 1306270 - 1311390 (-)

Gene ID: HRGMv2_2210_1_1095
Type: pfam
Location: 1311458 - 1312525 (-)

Gene ID: HRGMv2_2210_1_1096
Type: TC
Location: 1312610 - 1313416 (-)

Gene ID: HRGMv2_2210_1_1097
Type: TC
Location: 1313409 - 1314305 (-)

Gene ID: HRGMv2_2210_1_1098
Type: TC
Location: 1314380 - 1315699 (-)

Gene ID: HRGMv2_2210_1_1099
Type: TF
Location: 1316210 - 1317136 (-)

Gene ID: HRGMv2_2210_1_1100
Type: CAZyme
Location: 1317259 - 1319184 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.