Cluster: HRGMv2_2210_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2210
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_1028 | 1232887 | 1234791 | - | GH127 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_1029 | 1234801 | 1236690 | - | GH127 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1030 | 1236697 | 1237527 | - | 3.A.1.1.45 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1031 | 1237527 | 1238471 | - | 3.A.1.1.45 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1032 | 1238599 | 1239915 | - | 3.A.1.1.16 |
Gene ID: HRGMv2_2210_1_1028
Type: CAZyme
Location: 1232887 - 1234791 (-)
Type: CAZyme
Location: 1232887 - 1234791 (-)
Gene ID: HRGMv2_2210_1_1029
Type: CAZyme
Location: 1234801 - 1236690 (-)
Type: CAZyme
Location: 1234801 - 1236690 (-)
Gene ID: HRGMv2_2210_1_1030
Type: TC
Location: 1236697 - 1237527 (-)
Type: TC
Location: 1236697 - 1237527 (-)
Gene ID: HRGMv2_2210_1_1031
Type: TC
Location: 1237527 - 1238471 (-)
Type: TC
Location: 1237527 - 1238471 (-)
Gene ID: HRGMv2_2210_1_1032
Type: TC
Location: 1238599 - 1239915 (-)
Type: TC
Location: 1238599 - 1239915 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.