Cluster: HRGMv2_2210_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2210
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1012 | 1214080 | 1215915 | - | 9.B.33.1.1 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1013 | 1216004 | 1216834 | - | 3.A.1.1.41 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1014 | 1216837 | 1217694 | - | 3.A.1.1.7 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_1015 | 1217760 | 1219064 | - | 3.A.1.1.24 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_1016 | 1219209 | 1221857 | - | CBM67 | GH78 |
Gene ID: HRGMv2_2210_1_1012
Type: TC
Location: 1214080 - 1215915 (-)
Type: TC
Location: 1214080 - 1215915 (-)
Gene ID: HRGMv2_2210_1_1013
Type: TC
Location: 1216004 - 1216834 (-)
Type: TC
Location: 1216004 - 1216834 (-)
Gene ID: HRGMv2_2210_1_1014
Type: TC
Location: 1216837 - 1217694 (-)
Type: TC
Location: 1216837 - 1217694 (-)
Gene ID: HRGMv2_2210_1_1015
Type: TC
Location: 1217760 - 1219064 (-)
Type: TC
Location: 1217760 - 1219064 (-)
Gene ID: HRGMv2_2210_1_1016
Type: CAZyme
Location: 1219209 - 1221857 (-)
Type: CAZyme
Location: 1219209 - 1221857 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.