Cluster: HRGMv2_2210_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2210
- CGC Family ID: CGCFAM_00022
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_853 | 1007208 | 1009670 | - | GT4 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_854 | 1009686 | 1010813 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_2210_1 | HRGMv2_2210_1_855 | 1011708 | 1011956 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_856 | 1013039 | 1014451 | - | 9.B.18.1.2 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_857 | 1014515 | 1015216 | - | 8.A.3.2.3 |
Gene ID: HRGMv2_2210_1_853
Type: CAZyme
Location: 1007208 - 1009670 (-)
Type: CAZyme
Location: 1007208 - 1009670 (-)
Gene ID: HRGMv2_2210_1_854
Type: CAZyme
Location: 1009686 - 1010813 (-)
Type: CAZyme
Location: 1009686 - 1010813 (-)
Gene ID: HRGMv2_2210_1_855
Type:
Location: 1011708 - 1011956 (-)
Type:
Location: 1011708 - 1011956 (-)
Gene ID: HRGMv2_2210_1_856
Type: TC
Location: 1013039 - 1014451 (-)
Type: TC
Location: 1013039 - 1014451 (-)
Gene ID: HRGMv2_2210_1_857
Type: TC
Location: 1014515 - 1015216 (-)
Type: TC
Location: 1014515 - 1015216 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.