Cluster: HRGMv2_2210_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2210
- CGC Family ID: CGCFAM_00843
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_686 | 812926 | 814875 | - | GH127 |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_687 | 814862 | 816508 | - | GH35 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_688 | 816515 | 817351 | - | 3.A.1.1.45 |
| TC | HRGMv2_2210_1 | HRGMv2_2210_1_689 | 817348 | 818208 | - | 3.A.1.1.28 |
| STP | HRGMv2_2210_1 | HRGMv2_2210_1_690 | 818403 | 819701 | - | SBP_bac_1 |
| TF | HRGMv2_2210_1 | HRGMv2_2210_1_691 | 820075 | 820962 | + | HTH_AraC |
| CAZyme | HRGMv2_2210_1 | HRGMv2_2210_1_692 | 821119 | 823068 | + | GH43_32 |
Gene ID: HRGMv2_2210_1_686
Type: CAZyme
Location: 812926 - 814875 (-)
Type: CAZyme
Location: 812926 - 814875 (-)
Gene ID: HRGMv2_2210_1_687
Type: CAZyme
Location: 814862 - 816508 (-)
Type: CAZyme
Location: 814862 - 816508 (-)
Gene ID: HRGMv2_2210_1_688
Type: TC
Location: 816515 - 817351 (-)
Type: TC
Location: 816515 - 817351 (-)
Gene ID: HRGMv2_2210_1_689
Type: TC
Location: 817348 - 818208 (-)
Type: TC
Location: 817348 - 818208 (-)
Gene ID: HRGMv2_2210_1_690
Type: STP
Location: 818403 - 819701 (-)
Type: STP
Location: 818403 - 819701 (-)
Gene ID: HRGMv2_2210_1_691
Type: TF
Location: 820075 - 820962 (+)
Type: TF
Location: 820075 - 820962 (+)
Gene ID: HRGMv2_2210_1_692
Type: CAZyme
Location: 821119 - 823068 (+)
Type: CAZyme
Location: 821119 - 823068 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes contortus_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.